Publications

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2013

Shrestha PMalla, Rotaru A-E, Aklujkar M, Liu F, Shrestha M, Summers ZM, Malvankar N, Flores DCarlo, Lovley DR. 2013. Syntrophic growth with direct interspecies electron transfer as the primary mechanism for energy exchange.. Environ Microbiol Rep. 5(6):904-10.

Shetty A, Swaminathan A, Lopes JM. 2013. Transcription regulation of a yeast gene from a downstream location.. J Mol Biol. 425(3):457-65.

Shrestha PMalla, Rotaru A-E, Summers ZM, Shrestha M, Liu F, Lovley DR. 2013. Transcriptomic and genetic analysis of direct interspecies electron transfer.. Appl Environ Microbiol. 79(7):2397-404.

Benmerzouga I, Concepción-Acevedo J, Kim H-S, Vandoros AV, Cross GAM, Klingbeil MM, Li B. 2013. Trypanosoma brucei Orc1 is essential for nuclear DNA replication and affects both VSG silencing and VSG switching.. Mol Microbiol. 87(1):196-210.

Pold G, DeAngelis KM. 2013. Up against the wall: the effects of climate warming on soil microbial diversity and the potential for feedbacks to the carbon cycle.. Diversity. 5(2):409-425.

Orellana R, Leavitt JJ, Comolli LR, Csencsits R, Janot N, Flanagan KA, Gray AS, Leang C, Izallalen M, Mester T et al.. 2013. U(VI) reduction by diverse outer surface c-type cytochromes of Geobacter sulfurreducens.. Appl Environ Microbiol. 79(20):6369-74.

Shrestha PMalla, Nevin KP, Shrestha M, Lovley DR. 2013. When is a microbial culture "pure"? Persistent cryptic contaminant escapes detection even with deep genome sequencing. mBio. 4(2):e00591-12.

2014

Im J, Prevatte CW, Lee HGeun, Campagna SR, Löffler FE. 2014. 4-methylphenol produced in freshwater sediment microcosms is not a bisphenol A metabolite.. Chemosphere. 117:521-6.

Baek K, Wang M, McKeever R, Rieber K, Park C, Nüsslein K. 2014. Biodegradation of low concentrations of 1,2-dibromoethane in groundwater is enhanced by phenol.. Appl Microbiol Biotechnol. 98(3):1329-38.

Jeon E-J, Jung J-H, Seo D-H, Jung D-H, Holden JF, Park C-S. 2014. Bioinformatic and biochemical analysis of a novel maltose-forming α-amylase of the GH57 family in the hyperthermophilic archaeon Thermococcus sp. CL1.. Enzyme Microb Technol. 60:9-15.

Chen S, Rotaru A-E, Liu F, Philips J, Woodard TL, Nevin KP, Lovley DR. 2014. Carbon cloth stimulates direct interspecies electron transfer in syntrophic co-cultures.. Bioresour Technol. 173:82-86.

Muller M, Demeret C. 2014. CCHCR1 Interacts Specifically with the E2 Protein of Human Papillomavirus Type 16 on a Surface Overlapping BRD4 Binding. PLoS ONE. 9:e92581.

Jung J-H, Kim Y-T, Jeon E-J, Seo D-H, Hensley SA, Holden JF, Lee J-H, Park C-S. 2014. Complete genome sequence of hyperthermophilic archaeon Thermococcus sp. ES1.. J Biotechnol. 174C:14-15.

Feist AM, Nagarajan H, Rotaru A-E, Tremblay P-L, Zhang T, Nevin KP, Lovley DR, Zengler K. 2014. Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens.. PLoS Comput Biol. 10(4):e1003575.

Ueki T, Nevin KP, Woodard TL, Lovley DR. 2014. Converting carbon dioxide to butyrate with an engineered strain of Clostridium ljungdahlii.. mBio. 5(5):e01636-14.

Shrestha PMalla, Malvankar NS, Werner JJ, Franks AE, Elena-Rotaru A, Shrestha M, Liu F, Nevin KP, Angenent LT, Lovley DR. 2014. Correlation between microbial community and granule conductivity in anaerobic bioreactors for brewery wastewater treatment.. Bioresour Technol. 174:306-10.

Rotaru A-E, Shrestha PMalla, Liu F, Markovaite B, Chen S, Nevin KP, Lovley DR. 2014. Direct interspecies electron transfer between Geobacter metallireducens and Methanosarcina barkeri.. Appl Environ Microbiol. 80(15):4599-605.

Shanmugam R, Aklujkar M, Schäfer M, Reinhardt R, Nickel O, Reuter G, Lovley DR, Ehrenhofer-Murray A, Nellen W, Ankri S et al.. 2014. The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu.. Nucleic Acids Res. 42(10):6487-96.

Fang B, Jiang Y, Rotello VM, Nüsslein K, Santore MM. 2014. Easy come easy go: surfaces containing immobilized nanoparticles or isolated polycation chains facilitate removal of captured Staphylococcus aureus by retarding bacterial bond maturation.. ACS Nano. 8(2):1180-90.

Im J, Walshe-Langford GE, Moon J-W, Löffler FE. 2014. Environmental fate of the next generation refrigerant 2,3,3,3-tetrafluoropropene (HFO-1234yf).. Environ Sci Technol. 48(22):13181-7.

Liu X, Tremblay P-L, Malvankar NS, Nevin KP, Lovley DR, Vargas M. 2014. A Geobacter sulfurreducens strain expressing pseudomonas aeruginosa type IV pili localizes OmcS on pili but is deficient in Fe(III) oxide reduction and current production.. Appl Environ Microbiol. 80(3):1219-24.

Smith JA, Tremblay P-L, Shrestha PMalla, Snoeyenbos-West OL, Franks AE, Nevin KP, Lovley DR. 2014. Going wireless: Fe(III) oxide reduction without pili by Geobacter sulfurreducens strain JS-1.. Appl Environ Microbiol. 80(14):4331-40.

Jung J-H, Seo D-H, Holden JF, Park C-S. 2014. Identification and Characterization of an Archaeal Kojibiose Catabolic Pathway in the Hyperthermophilic Pyrococcus sp. Strain ST04.. J Bacteriol. 196(5):1122-31.

Zhang T, Tremblay P-L, Chaurasia AK, Smith JA, Bain TS, Lovley DR. 2014. Identification of genes specifically required for the anaerobic metabolism of benzene in Geobacter metallireducens.. Front Microbiol. 5:245.

Shieh P, M Siegrist S, Cullen AJ, Bertozzi CR. 2014. Imaging bacterial peptidoglycan with near-infrared fluorogenic azide probes.. Proc Natl Acad Sci U S A. 111(15):5456-61.

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